| connected.ppp {spatstat} | R Documentation |
Finds the topologically-connected components of a point pattern, when all pairs of points closer than a threshold distance are joined.
## S3 method for class 'ppp' connected(X, R, ...)
X |
A point pattern (object of class |
R |
Threshold distance. Pairs of points closer than |
... |
Other arguments, not recognised by these methods. |
This function can be used to identify clumps of points in a point pattern.
The function connected is generic. This is the method for
point patterns (objects of class "ppp").
The point pattern X is first converted into an abstract graph
by joining every pair of points that lie closer than R units
apart. Then the connected components of this graph are identified.
Two points in X belong to the same connected component if they
can be reached by a series of steps between points of X,
each step being shorter than R units in length.
The result is a vector of labels for the points of X
where all the points in a connected component have the same label.
A point pattern, equivalent to X except that the points
have factor-valued marks, with levels corresponding to the
connected components.
Adrian Baddeley Adrian.Baddeley@uwa.edu.au http://www.maths.uwa.edu.au/~adrian/ and Rolf Turner r.turner@auckland.ac.nz
Y <- connected(redwood, 0.13)
if(interactive()) {
plot(Y, cols=1:length(levels(f)))
plot(split(Y))
}